INtegrated TRAnscriptional REgulation Data platform

INtegrated TRAnscriptional REgulation Data platform (INTRARED) is a data platform for promoting the understanding of the transcriptional regulations. The platform integrates the data of cis-regulatory elements (CRE), trans-factors, and epigenomes.

About INTRARED
IMS RIKEN Center for Integrative Medical Sciences Tokyo Metropolitan Institute of Medical Science RIKEN BioResource Research Center Kyoto University
ChIP-Atlas

ChIP-Atlas

ChIP-Atlas is an integrative, comprehensive database to explore public epigenetic dataset, including ChIP-Seq, DNase-Seq, ATAC-Seq, and Bisulfite-Seq data, and to summarize binding sites of trans-factors and epigenomics markers.

fanta.bio

fanta.bio

fanta.bio is a database of cis-regulatory elements (CREs) with their genomic locations, activities in various cell types and states, and related genomic variations in human, mouse, and non-human primate genomes.